R-universe - bobverity (Bob Verity)

Basic Example2 years ago

Setup | Running the MCMC | Exploring outputs and checking MCMC performance | Using C++ functions

drjacoby 1.5.4Bob Verity and Pete Winskillexample.Rmd

Double well2 years ago

Model | Single temperature rung (no Metropolis coupling) | Multiple temperature rungs

drjacoby 1.5.4Bob Verity and Pete Winskillchecks_double_well.Rmd

Getting Model Fits2 years ago

A simple model of population growth

drjacoby 1.5.4Bob Verity and Pete Winskillgetting_model_fits.Rmd

Installing drjacoby2 years ago

Installing Rcpp | Installing and loading drjacoby

drjacoby 1.5.4Bob Verity and Pete Winskillinstallation.Rmd

Parallel Tempering2 years ago

Setup | Running the MCMC | How many rungs to use?

drjacoby 1.5.4Bob Verity and Pete Winskillmetropolis_coupling.Rmd

Running in Parallel2 years ago

Setup | Running multiple chains | Running multiple chains using C++ log likelihood or log prior functions

drjacoby 1.5.4Bob Verity and Pete Winskillparallel.Rmd

Using Likelihood Blocks5 years ago

Problem motivation | Defining blocks | The Likelihood

drjacoby 1.5.4Bob Verity and Pete Winskillblocks.Rmd

Multilevel example with blocks5 years ago

Model | MCMC | Plots

drjacoby 1.5.4Bob Verity and Pete Winskillchecks_multilevel_blocks.Rmd

Normal model5 years ago

Model | MCMC | Posterior plots

drjacoby 1.5.4Bob Verity and Pete Winskillchecks_normal_model.Rmd

Return prior5 years ago

Model | Run MCMC | Plots

drjacoby 1.5.4Bob Verity and Pete Winskillchecks_return_prior.Rmd